ChemMORT: an automatic ADMET optimization platform using deep learning and multi-objective particle swarm optimization
2024-03-01 Jiacai Yi, Ziyi Yang, Wentao Zhao, Zhijiang Yang, Xiaochen Zhang, Chengkun Wu, Aiping Lu, Dongsheng Cao Briefings in Bioinformatics

Drug discovery and development constitute a laborious and costly undertaking. The success of a drug hinges not only on good efficacy but also on acceptable ADMET properties. ChemMORT is an automatic ADMET optimization…

ABC-Net: a divide-and-conquer based deep learning architecture for SMILES recognition from molecular images
2022-03-01 Xiaochen Zhang, Jiacai Yi, Guoping Yang, Chengkun Wu, Tingjun Hou, Dongsheng Cao Briefings in Bioinformatics

ABC-Net proposes a divide-and-conquer architecture for translating molecular images into SMILES strings. By decomposing the recognition problem into coordinated sub-tasks, the model improves robustness across diverse…